Top7 is an artificial 93-residue protein, classified as a de novo protein since it was designed by Brian Kuhlman and Gautam Dantas in David Baker's laboratory at the University of Washington to have a unique fold not found in nature. The protein was designed ab initio on a computer with the help of protein structure prediction algorithms. Determination of the high-resolution X-ray structure of the experimentally expressed and purified protein revealed that the structure (PDB ID: 1QYS) was indeed very similar (1.2 Å RMSD) to the computer-designed model. The structure consists of two alpha helices packed on a five-stranded anti-parallel beta sheet.
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| - Top7 es una proteína artificial de 93 aminoácidos de largo, clasificada como una proteína de novo ya que fue diseñada por Brian Kuhlman y Gautam Dantas en el laboratorio de David Baker en la Universidad de Washington para tener un pliegue nunca antes visto en la naturaleza. La proteína fue diseñada ab initio en un computador con la ayuda de algoritmos de predicción estructural proteica. La determinación de la estructura de rayos X de la proteína reveló que la estructura (PDB ID: 1QYS) era muy similar (1,2 Å RMSD) al modelo diseñado informáticamente. La estructura consiste en dos hélices alfa empaquetado en una beta-lámina de cinco varas anti-paralelas. (es)
- Top7 is an artificial 93-residue protein, classified as a de novo protein since it was designed by Brian Kuhlman and Gautam Dantas in David Baker's laboratory at the University of Washington to have a unique fold not found in nature. The protein was designed ab initio on a computer with the help of protein structure prediction algorithms. Determination of the high-resolution X-ray structure of the experimentally expressed and purified protein revealed that the structure (PDB ID: 1QYS) was indeed very similar (1.2 Å RMSD) to the computer-designed model. The structure consists of two alpha helices packed on a five-stranded anti-parallel beta sheet. (en)
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| - Top7 es una proteína artificial de 93 aminoácidos de largo, clasificada como una proteína de novo ya que fue diseñada por Brian Kuhlman y Gautam Dantas en el laboratorio de David Baker en la Universidad de Washington para tener un pliegue nunca antes visto en la naturaleza. La proteína fue diseñada ab initio en un computador con la ayuda de algoritmos de predicción estructural proteica. La determinación de la estructura de rayos X de la proteína reveló que la estructura (PDB ID: 1QYS) era muy similar (1,2 Å RMSD) al modelo diseñado informáticamente. La estructura consiste en dos hélices alfa empaquetado en una beta-lámina de cinco varas anti-paralelas. Top7 fue presentada como la 'Molécula del Mes' por el Protein Data Bank (Banco de Datos de Proteínas) en octubre de 2005, y una superposición de sus respectivos núcleos (residuos 60-79) de sus estructuras predichas y rayos X son presentadas en el logo de Rosetta@home. (es)
- Top7 is an artificial 93-residue protein, classified as a de novo protein since it was designed by Brian Kuhlman and Gautam Dantas in David Baker's laboratory at the University of Washington to have a unique fold not found in nature. The protein was designed ab initio on a computer with the help of protein structure prediction algorithms. Determination of the high-resolution X-ray structure of the experimentally expressed and purified protein revealed that the structure (PDB ID: 1QYS) was indeed very similar (1.2 Å RMSD) to the computer-designed model. The structure consists of two alpha helices packed on a five-stranded anti-parallel beta sheet. Top7 was featured as the RCSB Protein Data Bank's 'Molecule of the Month' in October 2005, and a superposition of the respective cores (residues 60-79) of its predicted and X-ray crystal structures are featured in the Rosetta@home logo. (en)
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